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Microbiology and Plant Pathology

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lightbulbAbout this topic
Microbiology and Plant Pathology is the study of microorganisms, including bacteria, fungi, viruses, and nematodes, that affect plant health. This field examines the interactions between these pathogens and plants, focusing on disease mechanisms, host responses, and the development of management strategies to mitigate plant diseases.
lightbulbAbout this topic
Microbiology and Plant Pathology is the study of microorganisms, including bacteria, fungi, viruses, and nematodes, that affect plant health. This field examines the interactions between these pathogens and plants, focusing on disease mechanisms, host responses, and the development of management strategies to mitigate plant diseases.

Key research themes

1. How can molecular and microscopic diagnostic techniques improve identification and understanding of plant pathogenic microorganisms and plant tissue responses?

This research area investigates advanced diagnostic tools combining molecular methods (DNA-based detection, quantitative PCR) and microscopic/histochemical techniques to enable accurate identification, localization, and characterization of plant pathogens and host tissue responses. It is critical for early detection, mapping disease spread, understanding host-pathogen interactions, and informing targeted disease management strategies.

Key finding: Comprehensively reviews molecular detection methods emphasizing PCR-based technologies, highlighting the evolution from monoclonal antibody assays to DNA-based multiplex and high-throughput diagnostics. This paper outlines... Read more
Key finding: Evaluates histochemical staining and imaging methods (light, fluorescence, confocal, electron microscopy) for in situ localization of biomolecules, minerals, and metals (Zn, Fe) in plant tissues. Demonstrates how these... Read more
Key finding: Utilizes combined light and transmission electron microscopy to characterize colonization patterns and histological alterations in corn tissues infected with endophytic fungi Fusarium verticillioides, F. sacchari, and... Read more
Key finding: Provides a critical guide for designing qPCR assays, discussing DNA extraction optimization, target region selection, primer/probe design, sensitivity assessment, and quantification strategies. Addresses common methodological... Read more

2. What roles do microbial effectors and biological control agents play in modulating plant health and disease outcomes?

This theme focuses on the molecular and ecological functions of effector molecules secreted by both pathogenic and beneficial microbes in plants, as well as on the application of bacterial biocontrol agents to manage plant diseases sustainably. Understanding these interactions at molecular and applied levels advances the development of disease-resistant crops and environmentally friendly management practices.

Key finding: Discusses how secreted effector molecules from pathogens (fungi, oomycetes, bacteria) manipulate host immunity and physiology to facilitate infection or resistance. Highlights that effectors also occur in mutualistic... Read more
Key finding: Reviews bacterial genera (Pseudomonas, Bacillus, Streptomyces, among others) as microbial biocontrol agents (BCAs) with diverse mechanisms including competitive exclusion, antibiotic production, enzymatic degradation, and... Read more

3. How can histological and anatomical studies of plants aid in understanding disease resistance and the development of phytomedicines?

This area explores the use of histological staining and anatomical characterization to identify plant tissue structures related to disease resistance and medicinal properties. Detailed tissue-level analyses support the identification of bioactive compounds, verification of raw plant material quality for herbal medicine, and elucidation of plant-pathogen interactions at cellular levels.

Key finding: Uses carmine-green staining to differentiate cellulose and lignified tissues in stems of 11 medicinal plants used against bilharzia, enabling precise anatomical identification. Findings validate plant drug identity essential... Read more
Key finding: Confirms that cellulose and lignified tissues in stems can be reliably distinguished histologically, with implications for plant drug authentication. The comprehensive anatomical description assists in standardization and... Read more
Key finding: Demonstrates that ethanolic extracts of Lawsonia inermis leaf can effectively stain acidic and basic tissue components in histological sections and blood smears, possibly replacing synthetic dyes. This represents potential... Read more

All papers in Microbiology and Plant Pathology

Garlic is a significant cash crop in many regions of Ethiopia, but its yield is limited by several factors, including inappropriate clove size and inadequate nitrogen fertilizer. To assess the impact of clove size and nitrogen rates on... more
Garlic is an important cash crop in Ethiopia. However, the yield and quality of the crop is constrained by several factors. Among these, inadequate amount of nitrogen fertilizer is the major agronomic practice that significantly reduces... more
Garlic is an important cash crop in many regions of Ethiopia. However, the yield of the crop is constrained by several factors. Among these, inappropriate clove size is one of the major agronomic practices that can decrease the yield of... more
Woody plants are more difficult to reproduce than other plant species found in nature. In addition to seed dormancy, which is caused by inhibitors in the embryo, endosperm, and/or testicle, Phoenicia, like other juniper species, does not... more
Background: Groundnut stem rot, caused by Sclerotium rolfsii, is notorious for causing significant economic losses in groundnut production worldwide. Methods: A field trial on the integrated management of stem rot disease in groundnut was... more
Research into environmentally friendly methods for controlling nematodes in agricultural crops has gained significant momentum in recent years. This growing interest reflects a broader shift toward more ecologically... more
An isol ate of potyvirus was found to be associated with severe mosaic di sease in Narcisslls lazel/{! L. Electron microscopy, SDS-polyacrylamide gel electroph oresis of coat protein, serological rel ation ship and RT-PC R were carri ed... more
Background: W ilt disease caused by Fusarium oxysporum f.sp. ciceris in chickpea remains a persistent threat, leading to substantial losses in both quantity and quality. A roving survey was undertaken during rabi 2022-23 and 2023-24 to... more
Background: Cowpea crop suffer from various stresses, both biological and environmental, that reduce their quality and yield, leading to significant economic losses. Stem and root rot caused by Macrophomina phaseolina is a major root... more
Potato is suffered by many abiotic and biotic factors. Among biotic factors late blight disease (LBD) is the most important. The study was conducted during 2017 at Adet and Debre-Tabor to determine and evaluate the combination effect of... more
A set of 50 candidate and released bread wheat cultivars of Pakistan were studied to identify slow rusting resistance against yellow rust caused by Puccinia striiformis f. sp. tritici (PST). Seedling tests were done under glasshouse... more
Background: Rhizobacteria are essential for plant health by offering natural antagonism to soil-borne fungi. Rhizobacteria are regarded as an alternative to chemical agents for the integrated control of plant diseases and for enhancing... more
This study was conducted to determine the effect of integrated management of common bacterial blight (Xanthomonas axopodai) of bean on disease development, yield and yield components. A field experiment was conducted at Chena district... more
The experiments described in this chapter were conducted during the Kharif-2018-19.The RAPD marker can be used to find out diversity among different isolates of Fusarium oxysporum f.sp. melongenae. The highest genetic similarity to the... more
A mixed probit model was applied to survey data to analyzeconsumers’willingnessto buy apples with cosmetic damage caused by the sooty blotch and flyspeck (SBFS) disease complex. The analysis finds consumers will pay a premium for organic... more
Root rot caused by Rhizoctonia bataticola is a major constraint in green gram (Vigna radiata L.) cultivation, especially under high temperature and low soil moisture. This study assessed the severity of root rot and the associated impact... more
Green gram is one of the major pulse crops developed all over the world. Cercospora leaf spot disease is a critical annihilating disease of mungbean (Vigna radiata L.). It could be a broad disease caused by the organism Cercospora... more
Improper use of pesticides has been the most problematic factor in affecting the environment and pollinating insects. Therefore, this research was conducted to assess farmers' awareness and usage of insecticides for the protection of... more
The research work was conducted at department of plant pathology, University of Agriculture, Peshawar, Pakistan during 2012. The objective was to determine the fungal colony texture and colour of five different isolates of Fusarium... more
Small cardamom [Elettaria cardamomum (L.) Maton], the "Queen of Spices", which belongs to the ginger family (Zingiberaceae) is the third most expensive spice in the world, sought after saffron and vanilla. Cardamom hill reserves (CHR)... more
Brinjal is one of the important vegetable crops growing in India. Fruit rot brinjal caused by Alternaria alternata, Colletotrichum melongenae and Phomopsis vexans is one of the important diseases of brinjal. Hence, in this investigation,... more
Tomato plants grown in sterilized soil applied with Pseudomonas fluorescens grown on Jatropha cake resulted in highest recovery of P. flourescens from soil. Combined application of two bio-agents in the rhizosphere of tomato in sterilized... more
This study examined the nutritional value of Amaranths, Bidens pilosa, Cucurbita maxima, Ipomea aquatica, Cnidoscolus aconitifolius, and Brassica oleraceae var. acephala,. Laboratory analyses were performed to determine the proximate... more
Rashid [14] conducted pathogenicity test on mango seedlings and revealed that MLT6 was most aggressive isolate of Ceratocystis manginecans among all the isolates studied at
In the year 2009, a survey was conducted with the emphasis to ascertain the situation of foliar diseases of wheat in Punjab, Pakistan. Four diseases viz. spot blotch, powdery mildew, yellow and leaf rust were found prevalent. The disease... more
Monagas et al. . Grape-vine leaves possesses a resistance towards several fungus diseases as Plasmopara viticola, Oidium tukeri and Botrytis cinerea which cause downy mildew, powdery mildew and fruit rot, respectively . Flavonoids... more
Citrus leaf and fruit spot is one of the most important biotic constraints of citrus production in Ethiopia. The symptomatic leaf and fruit samples were collected from 29 orchards of 15 major citrus growing districts of Ethiopia. One... more
A permanente reflexao metodologica durante todo o processo da pesquisa, preocupando-se em questionar se a metodologia escolhida e capaz de apreender o objeto estudado e de extrema importância. No entanto, a Geografia, de uma maneira... more
An investigation was conducted to find out the association of Ganoderma spp. with the mortality of Acacia auriculiformis at Jahangirnagar University Campus, Bangladesh. Diseases severity of the tree was calculated where the highest (52.2... more
Tomato (Lycopersicon esculentum) is the world's largest growing vegetable crop. Many diseases and disorders affect tomatoes during its growing season. F. oxysporum is fungus pathogen widespread soil-borne plant pathogen. This plant... more
Taify grape is one of the important summer fruits in the Taif area in Saudi Arabia. A part of grape spoiled because by fungi and their toxins, influencing intersection processing, and export, alongside the quality of superior general... more
In the present study, cell-free cultures of four isolates of Rhizobium leguminosarum, an isolate of Azotobacter chroococcum and compost tea were investigated for their biocontrol potential against the root parasitic weed Orobanche... more
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Background: Cowpea crop is affected by various biotic and abiotic stresses which are responsible for its poor quality and low yield resulting in severe economic losses. Among the root diseases, stem and root rot caused by Macrophomina... more
Background: The chickpea, scientifically known as Cicer arietinum L., is a significant legume crop that serves as a valuable source of vegetable protein. The chickpea crop is susceptible to various pests and illnesses. Collar rot, induced... more
Leaf rust (caused by Puccinia triticina) continues to be the most important and widespread foliar disease of wheat in the Southern Cone. The P. triticina population of the region is extremely dynamic, leading to short-lived resistance in... more
Broad bean (Vicia faba L.) is an important grain legume, used in human and animal nutrition, stewed or fresh. It is one of the oldest domesticated vegetable species. In our country today, it is grown on small areas or fields, mostly for... more
Samples of roots of one-year old rubber plants were collected from mature plantations of RRIN, with no history of fertilizer application in Iyanomo and Akwete for microbiological analysis. The age of the sample plants was selected for... more
Sample collection and extraction: The potential extracts were selected from a screening of nineteen plant species. The plants were collected from Haramaya and Ambo areas of Ethiopia, in 2010. The experiment was conducted at the Plant... more
Fresh leaves of 21 plant species were collected from local sources. The identity of these plant species was confirmed at Haramaya University Herbarium where voucher specimens are deposited. The plants included
Burgaltai' cultivar of alfalfa is the most important forage in Mongolia and its yield had decreasing last decades due to cross pollination. This study was conducted for increasing leaf size of 'Burgaltai' cultivar through Agrobacterium... more
Burgaltai' cultivar of alfalfa is the most important forage in Mongolia and its yield had decreasing last decades due to cross pollination. This study was conducted for increasing leaf size of 'Burgaltai' cultivar through Agrobacterium... more
Burgaltai' cultivar of alfalfa is the most important forage in Mongolia and its yield had decreasing last decades due to cross pollination. This study was conducted for increasing leaf size of 'Burgaltai' cultivar through Agrobacterium... more
In the present study, screening of aqueous extracts obtained from five medicinally active plants (Melia azedarach, Cassia siamea, Murraya koenigii, Jatropha curcas and Delonix regia) was performed against Aspergillus niger, a causative... more
Recently, some defense responses were studied in avocado roots after infection with P. cinnamomi, which included the monitoring reactive oxygen species, total phenols, epicatechin and nitric oxide
Pectinases are essential enzymes and command a quarter of all food enzymes sold globally, and are recognized as excellent workhorses in a plethora of industries. These enzymes are mainly sourced from animals, microorganisms and plants,... more
The effects of neem formulations applied as soil drenching on the development of second stage juveniles (J2) of Meloidogyne javanica on roots of susceptible tomato cv. Tiny-Tim was investigated at controlled environment consisted of... more
Seed treatment is one of the main measures for controlling fungal diseases. Pyroligneous extract is derived from burning wood, resulting in a liquid condensed from the smoke, which has biostimulant, chelating and phytosanitary properties,... more
Productivity of faba bean is highly constrained by an emerging and destructive faba bean gall (FBG) disease caused by the fungus Physoderma. Field surveys were conducted to assess the spatial and temporal distribution as well as intensity... more
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