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General Microbiology

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lightbulbAbout this topic
General Microbiology is the branch of biology that studies microorganisms, including bacteria, viruses, fungi, and protozoa. It encompasses their classification, physiology, genetics, ecology, and interactions with hosts and the environment, providing insights into their roles in health, disease, and biogeochemical cycles.
lightbulbAbout this topic
General Microbiology is the branch of biology that studies microorganisms, including bacteria, viruses, fungi, and protozoa. It encompasses their classification, physiology, genetics, ecology, and interactions with hosts and the environment, providing insights into their roles in health, disease, and biogeochemical cycles.

Key research themes

1. How do microbiological methodologies enhance identification and characterization of bacteria in clinical and environmental samples?

This research area focuses on the development and application of biochemical tests, culturing techniques, molecular methods, and advanced analytical tools for the rapid and accurate identification of bacteria from diverse sources such as clinical infections, environmental samples, and food products. It is crucial because precise bacterial identification informs diagnosis, guides treatment, aids surveillance, and supports environmental monitoring and food safety.

Key finding: This paper offers a standardized, simplified protocol for bacterial identification using a suite of biochemical tests starting from Gram staining and morphological characterization to specific biochemical assays, enabling... Read more
Key finding: The study presents a manually curated database profiling over 7,500 microbial species characterized by traits including optimal growth conditions, Gram stain, antimicrobial resistance, spore formation, and biofilm... Read more
Key finding: Molecular techniques such as PCR and 16S rRNA sequencing coupled with conventional culture and biochemical analysis were successfully employed to identify key bacterial pathogens including Streptococcus pneumoniae and... Read more
Key finding: While the full text is cut off, the paper involves isolation and physiological characterization of Plant Growth-Promoting Rhizobacteria (PGPR) from plant rhizosphere, implying the use of microbiological and biochemical assays... Read more
Key finding: Detailed biochemical characterization and purification methodology of Streptomyces chitinase were established, including enzyme assay development and culturing techniques. Identification incorporated colony morphology,... Read more

2. What are the prevalence, antimicrobial susceptibility profiles, and microbiological characteristics of clinically relevant bacterial pathogens in human infections?

This theme investigates the isolation, identification, and antibiotic resistance patterns of pathogenic bacteria causing infections such as urinary tract infections, respiratory tract infections, and throat infections in various populations. Findings provide insight into pathogen distribution, resistance trends, and implications for clinical treatment and public health interventions.

Key finding: The study reported a 58.3% prevalence of urinary tract infections among sampled patients with Escherichia coli identified as the predominant pathogen (45.7%), followed by Staphylococcus saprophyticus, Staphylococcus aureus... Read more
Key finding: Streptococcus pneumoniae was the most prevalent pathogen in throat infections, followed by other Gram positive and Gram negative bacteria including Enterobacter bugandensis identified by 16S rRNA sequencing. Multi-drug... Read more
Key finding: Investigation of wild boars as a reservoir revealed that 17.1% harbored Y. enterocolitica, predominantly biotype 1A strains, which are often avirulent though some carried virulence-related genes (ail). The isolates exhibited... Read more
Key finding: This research identified an exocellular common antigen among pathogenic serotypes of Y. enterocolitica grown under specific conditions; characterization utilizing proteomic and immunological methods demonstrated antigen... Read more

3. How can modification of environmental parameters and natural compounds improve microbial detection and control, including pathogen diagnostics and food preservation?

Focus is placed on strategies such as optimizing culture conditions for faster pathogen identification, applying natural antimicrobial agents to extend food shelf life, and investigating microbial responses in environmental and clinical settings. These approaches aim to accelerate diagnostics and enhance microbial control with practical, accessible interventions.

Key finding: Elevating incubation temperature to 42°C combined with vitamin B12 supplementation significantly reduced bacterial lag phase by 4%-49% across multiple clinical isolates, including E. coli in blood cultures, thereby... Read more
Key finding: Application of lime juice at concentrations of 50-100% effectively inhibited microbial growth, including coliforms and aerobic bacteria, in zobo drink over 3 to 5 days at room temperature. The study demonstrates lime juice as... Read more
Key finding: Microbiological analysis of shellfish samples revealed low E. coli concentrations and absence of Salmonella and Vibrio spp., indicating suitability for human consumption. Phenotypic identification flagged additional bacterial... Read more
Key finding: Biological synthesis of silver nanoparticles utilizing microorganisms and plant extracts offers an environmentally friendly, cost-effective alternative to physical and chemical methods. Silver nanoparticles produced display... Read more

All papers in General Microbiology

Transfer of bacteriocin factors from bacteriocinogenic to other staphylococci was observed at high frequency on the basis of paradoxical inhibition (pi.) on two media (BTM and MPI). Colonies of non-bacteriocinogenic sensitive bacteria... more
Protozoa ciliates are the important components of the "microbial loop". Protozoa are unicellular, phagotrophic organisms. They are found in lake, river and pond. Ciliates and other protoctists are believed to play a remarkable metabolic... more
Intravenous inoculation of an attenuated agerminative strain of Candida albicans (PCA-2) of low virulence, but not of two other species of Candida of low virulence (C. parapsilosis and C. viswanathii) into CD2F 1 mice conferred protection... more
In the presence of S-adenosyl-L-methionine, cell-free extracts of Streptomyces sp. C5, Streptomyces peucetius ATCC 29050, Streptomyces insignis ATCC 31913 and Streptomyces coeruleorubidus ATCC 31276 0-methylated carminomycin and... more
The classification of plant-pathogenic coryneform bacteria has been revised many times. All plant-pathogenic coryneform bacteria were once classified in the genus Corynebacterium. Currently, all are classified in the genera Arthrobacter,... more
Fingerprinting by random amplification of polymorphic DNA (RAPD) was compared with existing molecular typing systems for Candida albicans. Fifteen isolates were chosen, including three from the same patient; these gave 14 distinct... more
Lipoarabinomannan (LAM), a major lipoglycan of the mycobacterial cell envelope, was previously recognized as existing in two major forms: LAM with arabinofuranosyl (Arafl-containing termini (AraLAM) and a mannosecapped version (ManLAM) in... more
The effects of addition of exogenous spermidine and spermine and of two inhibitors of polyamine biosynthesis, a- difluoromethylomithine (DFMO), which decreases spermidine concentrations, and n-butyl-1,3-diaminopropane, which depletes... more
Polyacrylamide gel electrophoresis of extracellular pectinase and amylase isozymes of 170 mainly terverticillate Penicillium strains was undertaken. The data were coded and subjected to numerical analysis. Variation in intensity of... more
Ammonia assimilation in Rhizobium leguminosarum biovar viceae strain RCRlOO 1 (hereafter called R . leguminosarum) appears to take place only through the glutamine synthetase/glutamate synthase pathway since (a) no glutamate dehydrogenase... more
by J War
Resistant strains of Aspergillus nidulans were obtained by one-step selection on high concentrations of various inhibitors; each strain was mutant in a different gene conferring resistance to actidione (Act), p-fluorophenylalanine ( p f )... more
Mucoid variants of Pseudomonas aeruginosa isolated in vitro or in vivo could be classified into two phenotypic groups based on whether alginate was produced on a chemically defined medium. Mucoid strains yielded lower recombination... more
Spontaneous alginate-producing (muc) variants were isolated from strains of Pseudomonas Jluorescens, P. putida and P. mendocina at a frequency of 1 in lo8 by selecting for carbenicillin resistance. The infrared spectrum of the bacterial... more
Mucoid variants of Pseudomonas aeruginosa isolated in vitro or in vivo could be classified into two phenotypic groups based on whether alginate was produced on a chemically defined medium. Mucoid strains yielded lower recombination... more
Electrophoretic patterns of esterases, phosphatases, of malate, glucose-6phosphate and a-glycerophosphate dehydrogenases, and of other soluble proteins of 69 isolates representing 2 I species of Xanthomonas were determined.... more
The genetic diversity of symbiosis (Sym) plasmids was investigated in samples from two field populations of Rhizobiurn legurninosarurn biovar viceae that had previously been characterized for chromosomally-encoded enzyme electrophoretic... more
Growth assays reveal that Rhodococcus rhodochrous IGTSS uses a wide range of organosulphur compounds as the sole source of sulphur, yet none of the compounds serve as carbon sources. Compounds that are utilized include thiophenes,... more
Variation in epitopes of the B subunit of cholera toxin (CT-B) produced by strains of El Tor and classical biotype Vibrio cholerae 0 1 was examined using monoclonal antibodies prepared to V. cholerae 569B CT. CT-B epitopes were markedly... more
The basis of tetracycline resistance mediated by TetA determinants and joint resistance to tetracycline and minocycline coded by TetB determinants was investigated. The TetA class of determinants was represented by those carried on... more
Several potential target sites for multiple regulatory mechanisms were previously identified in the 5' flanking region of the pts operon. We have investigated the in vitro interactions of the cAMP receptor protein (CRP).cAMP... more
A DNA-mediated transformation system was developed for the aquatic filamentous fungus Achlya ambisexualis using the chimeric plasmid vector pSV2neo2p.m. Hyphal colonies resistant to the neomycin analogue G-4 18 sulphate were regenerated... more
Incorporation of polysaccharides into the walls of regenerating protoplasts of Candida albicans was followed in the presence of papulacandin B, tunicamycin and nikkomycin. With the first drug, chitin was incorporated normally whereas... more
Sfreptomyces lividans was investigated for extracellular proteinases. The major extracellular proteinase activity detected under all conditions tested was L-leucine aminopeptidase activity. Slight extracellular L-proline aminopeptidase... more
Streptomyces sp. strain C5, an organism that normally produces baumycins, daunomycin and E-rhodomycinone, was treated with N-methyl-N'-nitro-N-nitrosoganidine (NTG). Mutants blocked at various points in daunomycin and baumycin production... more
Rapidly reannealing DNA, containing repeated base sequences, was shown to be present in the genomes of four Rhizobium bacteriophages by studies of renaturation kinetics. Estimations of the mol. wt. of the DNA by measurement of kinetic... more
A laboratory yeast isolate identified as Exophiala jeanselmei synthesized melanin and showed polyphenol oxidase activity with dihydroxyphenylalanine (DOPA) and pyrogallol. Electrophoresis on native and denaturing gels, and activity... more
A genomic library of Yersiniapestis EV76c created in a cosmid vector was screened for clones capable of binding type IV collagen. An unexpectedly high number of such clones was observed. One recombinant plasmid was selected for further... more
Twenty-two monoclonal antibodies (mAbs) specific for smooth lipopolysaccharide (S-LPS) were generated by fusion of spleen cells from mice infected with the rough Brucella melitensis strain B115 with the NSO myeloma. According to... more
Plasmid pEST4011 enables Pseudomonas putida Paw85 to degrade 2,4-dichlorophenoxyacetic acid (2,4-D) and 3-chlorobenzoate (3-CBA). This new 2,4-D degradative plasmid has considerable homology with the regions of pJP4 containing the 2,4-D... more
The immunochemical and immunocytochemical characteristics of three Acinetobacter calcoaceticus RAG strains were compared in order to clarify the relationship between antibodyinduced agglutination and the production of polyanionic... more
Sexual adhesion in the green alga Chlamydomonas eugametos is mediated by hydroxyproline-containing glycoproteins (agglutinins). The agglutinins were metabolically labelled with [35S]sulphate. The sulphur-containing amino acids methionine... more
The g t f S gene, coding for a glucosyltransferase which synthesizes water-soluble glucan and previously cloned from Streptococcus downei strain MFe28 (mutans serotype A) into a bacteriophage vector, was subcloned into a plasmid vector.... more
The gene encoding a glucosyltransferase which synthesized water-insoluble glucan, g t f l , previously cloned from Streptococcus sobrinus strain MFe28 (mutans serotype h) into a bacteriophage 2 vector, was subcloned into the plasmid... more
The contribution of activated macrophages to protection against Escherichia coli was studied in mice. Mice treated intraperitoneally with killed Corynebacterium paruurn organisms 1 d prior to challenge showed an increased resistance to... more
Two families of glycoprotein are defined in DictyosteZium discoideum by the presence of different glycoconjugates, both of which are highly immunogenic in mice. The previously described monoclonal antibodies MUD50 and MUD62 recognize the... more
Mutants of Bacillus subtilis 168 were isolated which allow adsorption but not infection by bacteriophage SPPl. The adsorbed phages can be subsequently recovered in active form. From ten other bacteriophages tested, only the SPP1-related... more
Removal of the growth medium and resuspension of BfastocfdefZa emersonii vegetative cells in a sporulation medium resulted in an abrupt fall of fructose 2,6-bisphosphate concentration to about 2 % of its initial value within 1Omin. The... more
Fourteen yeast strains from six genera were analysed for the presence of long-chain alcohols. Six strains from three genera contained long-chain alcohols, highest levels being found in Candida afbicans. The alcohols were identified and... more
The genus Bacteroides contains a number of biochemically and physiologically heterogeneous groups of organisms and needs taxonomic revision. In this study cellular fatty acids from a number of Bacteroides spp. were identified and... more
In Streptomyces venezuelae fertility, defined as chromosomal gene recombination, was enhanced over 1000-fold when one parent in a biparental conjugational cross lacked the physicallyundetected plasmid SVP1, as compared with crosses in... more
Twenty-five strains of lactobacilli were tested for their ability to adhere to human enterocyte-like Caco-2 cells in culture. Seven Lactobacillus strains adhered well to the Caco-2 cells, of which three possessed calcium-independent... more
The Dictyosteliurn discoideum glycogen phosphorylase-1 (gp-1) exhibits a complex pattern of developmental expression in which differential temporal regulation of enzyme activity, protein levels and mRNA levels is observed. This pattern of... more
Yersiniosis is strongly associated with the consumption of pork contaminated with enteropathogenic Yersinia enterocolitica, which is harbored by domestic pigs without showing clinical signs of disease. In contrast to data on Y.... more
Cassava (Manihot esculenta Crantz) is a major carbohydrate source in the human diet, yet certain varieties harbor high cyanogenic glycoside concentrations, posing risks of cyanide toxicity. This study sought to determine cyanide... more
A pleiotropic dinitrogen and nitrate assimilation mutant was obtained by mutagenesis of Nostoc sp. strain ATCC 29133 with N-methyl-N'-nitro-N-nitr~~dine followed by penicillin counterselection in the presence of NO, and N2. Mutant strain... more
Schizosaccharomyces pombe cell walls contain two major glycoprotein species, I and 11, with molecular masses of 2 x lo6 and 5 x lo5 Da respectively, as determined by gel filtration chromatography and PAGE. The ratio of sugar to protein is... more
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