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Yeast Identification

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lightbulbAbout this topic
Yeast identification is the scientific process of classifying and distinguishing various species of yeast organisms, primarily through morphological, biochemical, and genetic methods. This field is crucial in microbiology, food science, and biotechnology, as it aids in understanding yeast diversity, fermentation processes, and their applications in various industries.
lightbulbAbout this topic
Yeast identification is the scientific process of classifying and distinguishing various species of yeast organisms, primarily through morphological, biochemical, and genetic methods. This field is crucial in microbiology, food science, and biotechnology, as it aids in understanding yeast diversity, fermentation processes, and their applications in various industries.

Key research themes

1. How can molecular and phenotypic techniques improve the accuracy and speed of yeast species identification in clinical and industrial settings?

This theme investigates the efficacy and optimization of various molecular, biochemical, and culture-based methods for the reliable identification of yeast species, especially in clinical diagnostics and biotechnological processes. Accurate species identification is critical for targeted antifungal treatment, detection of mixed infections, and quality control in fermentation, as different yeast species can differ significantly in pathogenicity, drug resistance, and technological traits.

Key finding: Combining chromogenic medium subculture with MALDI-TOF MS yielded a yeast species identification turnaround time under 0.35 days with 98.79% isolates identified on the first or second MALDI-TOF attempt, and detected mixed... Read more
Key finding: The 21-plex PCR assay accurately identified 87.3% of yeast isolates, outperforming API 20C AUX (83.7%) and achieving 100% identification of key Candida species; combining 21-plex PCR and API 20C AUX raised correct... Read more
Key finding: Expanding the MALDI Biotyper database with 143 locally relevant yeast strains improved identification accuracy to near 100% for 388 regional clinical yeast isolates across 55 species, highlighting the importance of database... Read more
Key finding: API 20 C microtube biochemical tests correctly identified 95% of 300 clinical yeast isolates compared to 98.7% by conventional methods, showing good agreement in carbohydrate fermentation and assimilation tests. While useful... Read more
Key finding: While conventional phenotypic methods remain common in clinical yeast diagnosis, molecular techniques like DNA sequencing have significantly improved sensitivity and specificity, enabling reliable differentiation of Candida... Read more

2. What is the ecological diversity and biotechnological potential of yeast species isolated from natural, food, and industrial environments?

This theme explores the discovery, molecular identification, and characterization of yeast strains from diverse environments such as marine ecosystems, fermented food matrices, forest soils, and bio-waste residues. Insights include the taxonomic diversity present, adaptation to environmental stresses, biochemical profiles relevant for biotechnology (e.g., lipid content, enzyme activities), and utilization as starter cultures or single cell proteins/oils. Understanding these characteristics enhances strain selection for industrial applications like bioethanol production, food fermentation, and oleochemical synthesis.

Key finding: Five marine yeast strains were identified molecularly (ITS1 and D1/D2 sequencing) as species including Yarrowia lipolytica and Candida tenuis, exhibiting protein content up to 40%, essential amino acids up to 64% of total... Read more
Key finding: Identification of nine yeast species from 433 isolates across fermented doughs and cereal matrices revealed species diversity with low intra-dough but high inter-dough variation. Phenotypic assessments identified strains with... Read more
Key finding: From 127 yeast strains isolated from mountain forest soils, 78 strains representing 10 species accumulated cellular lipids exceeding 20% of dry biomass, including two species (Papiliotrema terrestris and P. flavescens) newly... Read more
Key finding: Molecular techniques (PCR-RFLP and MSP-PCR) identified diverse yeast genera including Debaryomyces, Yarrowia, and Candida in Turkish cheeses. Isolates exhibited proteolytic, lipolytic, and antagonistic activities (e.g.,... Read more

3. What is the clinical and environmental distribution of opportunistic and pathogenic yeast species, and how does this impact infection risk and diagnosis?

This research area focuses on identifying pathogenic yeast species beyond clinical settings, understanding their environmental reservoirs, assessing their role in infections, and improving detection in clinical samples. It addresses the rising clinical importance of non-albicans Candida and other novel yeasts, their antifungal resistance profiles, and the implications for infection management. This theme underscores the complexity of yeast ecology in natural carriers and fomites, which affects disease epidemiology and diagnostic accuracy.

Key finding: Fifty-four opportunistic pathogenic yeast strains, including Candida albicans, C. glabrata, and Pichia kudriavzevii, were isolated from approximately 1,000 diverse U.S. environmental samples such as fruits and soil,... Read more
Key finding: Molecular identification of 202 clinical yeast strains revealed 121 non-albicans Candida (NAC) species and uncommon yeasts like Trichosporon asahii and Pichia terricola; P. terricola was first reported as a urinary pathogen... Read more
Key finding: Among 176 yeast isolates predominantly from Candida genus, DNA sequencing identified species with higher accuracy (99.4%) than MALDI-TOF MS (89%). Most isolates were resistant to azole antifungals, especially non-albicans... Read more
Key finding: The study verified the non-cytotoxic nature of isolated marine yeasts on human embryonic kidney (HEK 293) cells, indicating potential safety for biotechnological applications and suggesting that environmental yeast isolates... Read more

All papers in Yeast Identification

In the last century, the exponential increase of industrial food production led to the disappearance of "Italian traditional niche products". However, national regulations allowed the preservation of several of these products, including... more
In the last century, the exponential increase of industrial food production led to the disappearance of “Italian traditional niche products”. However, national regulations allowed the preservation of several of these products, including... more
The quality evaluation of white soft cheese in the Egyptian markets is an urgent need to create awareness among population about the existing situation and to protect the consumer's health and rights. Thus, the aim of this work was to... more
A case study of the indigenous technology for processing white soft cheese was conducted in the town of Lumban in Laguna, Philippines. Information was gathered on the demographic profile of two cheese makers; their indigenous knowledge... more
This research was conducted to study the morphological characteristics of the main yeast strains isolated from table olives (colour, shape of colonies, production of compounds around the colonies) and the genetic ones (molecular... more
The quality evaluation of white soft cheese in the Egyptian markets is an urgent need to create awareness among population about the existing situation and to protect the consumer's health and rights. Thus, the aim of this work was to... more
The yeasts present during the ripening process of ewes' and goats' cheeses produced in a small traditional dairy in Mediterranean Spain were isolated and identified. Five hundred and thirty strains pertaining to eleven yeast species... more
Six types of unripened raw milk fresh (Robiola, Crescenza, Primo sale and Formaggella) and "pasta filata" cheeses (Mozzarella and Burrata) were evaluated for microbiological parameters. No Listeria monocytogenes or Salmonella spp. were... more
Ten strains of a new endophytic ascosporeforming, methanol-assimilating yeast were isolated from the galls induced by sawflies on the leaves of willows in the Losiny Ostrov National Park (Moscow region). Standard phenotypical tests and... more
Scolytine bark beetles are the most destructive pests of conifers; they sometimes aggregate in such large numbers that they actually kill their hosts. They maintain close relationships with yeasts and fungi, in particular those that are... more
The aim of this study was to assess the microbiological quality and safety of some cheeses produced in Apulia region, Southern Italy, and classified as "traditional agri-food products." A total of 120 samples were collected and analyzed.... more
A total number of 60 samples from traditional fermented milk “Rayeb” was randomly collected from different localities in Sfax governorate, Tunisia and subjected to determination of pH, sensory evaluation and determination of total yeast... more
Multi Fragment Melting Analysis System (MFMAS) is a novel approach that was developed for the species-level identification of microorganisms. It is a software-assisted system that performs concurrent melting analysis of 8 different DNA... more
by mine erdem and 
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Multi Fragment Melting Analysis System (MFMAS) is a novel approach that was developed for the species-level identification of microorganisms. It is a software-assisted system that performs concurrent melting analysis of 8 different DNA... more
Background and Aim: Milk is a food of high nutritional value, which occupies an undeniable place in the human food ration, but is an ideal medium for microbial growth. This study aims to assess the hygienic quality of local raw and... more
The cheese microbial ecosystem is complex, and the presence of nonstarter adventitious microorganisms in milk may have an influence on the organoleptic characteristics of cheese. The aim of this study was to analyze the composition and... more
Background and Aims: Non-steroidal anti-inflammatory drugs (NSAIDs) are consumed in treatment of inflammation and pain in many conditions. New derivatives of Aryliliden-2 (-3 chloro anilino) nicotinic acid hydrazide, were synthesized in... more
All the reports to date on the anti-inflammatory activity of chitooligosaccharides (COS) are mostly based on in vitro methods. In this work, the anti-inflammatory activity of two COS mixtures is characterized in vivo (using balb/c mice),... more
Food contamination, either from microbiological or chemical, is the highest concern for public health. The dairy products such as cheese have an essential role in human nutrition but have been linked with outbreaks of foodborne illness.... more
A yeast strain was isolated during a study on vineyard-associated yeast strains from Apulia in Southern Italy. ITS and LSU D1/D2 rDNA sequences showed this strain not to belong to any known species and was described as the type strain of... more
Multi Fragment Melting Analysis System (MFMAS) is a novel approach that was developed for the species-level identification of microorganisms. It is a software-assisted system that performs concurrent melting analysis of 8 different DNA... more
The aim of this study was to assess the microbiological quality and safety of some cheeses produced in Apulia region, Southern Italy, and classified as "traditional agri-food products." A total of 120 samples were collected and analyzed.... more
Scolytine bark beetles are the most destructive pests of conifers; they sometimes aggregate in such large numbers that they actually kill their hosts. They maintain close relationships with yeasts and fungi, in particular those that are... more
2-Pyrazolines 7-12 bearing a carboxylic acid ester or a carboxamide side-chain have been prepared by treatment of the appropriate chalcone derivatives 2-6 with hydrazine hydrate or phenylhydrazine in hot acetic acid.... more
Teleomorphic species of the genus Zygozyma and anamorphic species of the genus Myxozyma were examined phylogenetically. In phylogenetic trees based on 18S rRNA-, 26S rRNA-, mitochondrial small subunit rRNA-and EF-1α-gene sequences and... more
In this paper, we described the pharmacological and toxicological studies of three pyrazolone derivatives namely PYZ1: 4-[4-N dimethylamino benzylidine]-3-methyl pyrazolin-5(4H)-one, PYZ2:... more
Recent changes in the epidemiology of candidiasis highlighted an increase in non-Candida albicans species emphasizing the need for reliable identification methods. Molecular diagnostics in fungal infections may improve species... more
The PCR amplification and subsequent restriction analysis of the ribosomal region spanning the internal transcribed spacers ͑ITS1 and ITS2͒ and the 5.8S rRNA gene is applied to the identification of yeasts belonging to the genus Candida.... more
Dialkylamino-3-coumarinyl)pyrazolines and their julolidine analog have been synthesized and proved as new effective photogenerators of acidity. Having D-p-linker ÀA conjugated system of pushpull type these compounds possess intensive... more
Purpose: To synthesize and characterize novel hydroquinone compounds that exhibit an aspirin-like pharmacological profile devoid of ulcerogenic side effects. Methods: Two novel hydroquinone derivatives, viz,... more
Scolytine bark beetles are the most destructive pests of conifers; they sometimes aggregate in such large numbers that they actually kill their hosts. They maintain close relationships with yeasts and fungi, in particular those that are... more
Background and Aim: Milk is a food of high nutritional value, which occupies an undeniable place in the human food ration, but is an ideal medium for microbial growth. This study aims to assess the hygienic quality of local raw and... more
Recent changes in the epidemiology of candidiasis highlighted an increase in non-Candida albicans species emphasizing the need for reliable identification methods. Molecular diagnostics in fungal infections may improve species... more
Four halotolerant yeast strains, M21T, M34-1, HS054 and D41, were isolated from various foods in South-East Asia. These isolates were most closely related to Pichia anomala, with which each strain had from zero to two differences in the... more
The quality evaluation of white soft cheese in the Egyptian markets is an urgent need to create awareness among population about the existing situation and to protect the consumer's health and rights. Thus, the aim of this work was to... more
The present study was designed to investigate the gastroprotective, analgesic, and antipyretic effects of curcumin (Cur), the major constituent of turmeric. Acetylsalicylic acid (ASA) was used in this study as a standard drug for... more
Cheese is a dairy product with a high nutritional value, a unique flavor, aroma, a long shelf life, and a very different variety. Cheese may be contaminated with harmful microorganisms which may pose a risk to public health during the raw... more
The identification of twenty four yeast isolates from cheese performed with API ID 32C simplified assimilation test and restriction fragments length polymorphism (PCR-RFLP) of ITS1-5.8S rDNA-ITS2 region was compared. The accordance of the... more
Identification of Yarrowia lipolytica (Ascomycota: Hemiascomycetes) as a contaminant in obtaining amplified 28S rRNA gene of mollusks
The main objective of this research was to study the safety aspects of two Sudanese street foods, namely: Tamia (Falafil) and Dakwa (peanut butter) collected from different sources in Khartoum State. Samples for Tamia were obtained from... more
Scolytine bark beetles are the most destructive pests of conifers; they sometimes aggregate in such large numbers that they actually kill their hosts. They maintain close relationships with yeasts and fungi, in particular those that are... more
Healthy food production is the main priority of food technology and dairy products which plays an important role in the household food basket. Traditional dairy products take a large part in the market and sometimes are causing... more
Two yeasts isolated from laboratory reared adult coffee berry borers [ Hypothenemus hampei (Ferrari) (Coleoptera: Scolytidae)] and from insects collected in the field in Colombia were identified as Pichia burtonii Boidin and Candida... more
Thrust in the preparation of new heterocyclic molecules is increasing due to their proven significant biological activities. The paramount importance of heterocycles such as indoles and their derivatives in natural product chemistry and... more
soft cheese pseudomonas antibiotic sensitivity potassium sorbate One hundred and twenty five random samples of white soft cheese, fifty of each Damietta, kariesh and twenty five of Feta cheese were collected from street vendors,... more
Purpose: To synthesize and characterize novel hydroquinone compounds that exhibit an aspirin-like pharmacological profile devoid of ulcerogenic side effects. Methods: Two novel hydroquinone derivatives, viz,... more
In order to develop an efficient an system for waste water pretreatment, the isolation of indigenous population of microorganisms from pharmaceutical waste water was done. We obtained pure cultures of 16 yeast isolates that differed... more
The identification of twenty four yeast isolates from cheese performed with API ID 32C simplified assimilation test and restriction fragments length polymorphism (PCR-RFLP) of ITS1-5.8S rDNA-ITS2 region was compared. The accordance of the... more
The genetic diversity of the types or authentic strains of 20 facultative synonyms of Pichia membranifaciens (E.C. Hansen) E.C. Hansen was revealed on the basis of large-subunit (26S) rDNA D1/D2 domain and internal transcribed spacer... more
Background and Aim: Milk is a food of high nutritional value, which occupies an undeniable place in the human food ration, but is an ideal medium for microbial growth. This study aims to assess the hygienic quality of local raw and... more
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