Key research themes
1. What evidence supports the ubiquity and evolutionary origins of sexual reproduction in eukaryotes and how does molecular machinery underlie these processes?
This research theme explores the ancient and widespread nature of sexual reproduction across eukaryotic life forms, including unicellular protists, and investigates the molecular components driving cell and nuclear fusion processes. It addresses evolutionary origins of sex, its presence in the last eukaryotic common ancestor (LECA), and the role of molecular mechanisms in maintaining the balance between clonal propagation and episodic sexual events. Understanding these facets clarifies fundamental biological strategies for survival and genome maintenance in eukaryotes.
2. How does molecular evolutionary ecology theory explain the diversity and interaction of molecular replicators, including viruses and transposons, in biological systems?
This theme investigates molecular replicators' evolutionary ecology, encompassing viruses, transposons, and similar genetic elements, through theoretical models unifying evolutionary game theory and ecological dynamics. It examines the promiscuous use of gene products among replicators, the existence of novel replicators exploiting viruses like lentiviruses, and implications for host immunity and evolutionary interactions. The approach bridges molecular biology and evolutionary theory to provide predictions about replicator dynamics and their ecological roles.
3. What are the mechanisms and evolutionary consequences of reproduction dynamics, including mating patterns and genomic inheritance, in hybrid and complex organisms?
Focused on reproductive dynamics in hybrid complexes and organisms with complex genomic structures (e.g., polyploids and hybrids), this theme explores how mating preferences, heredity mechanisms such as uniparental inheritance, and chromosomal rearrangements shape population structure, fertility, and species isolation. It encompasses studies in fish, fungi, and experimental hybrids to unravel how reproductive interactions influence genotypic composition, hybrid sterility, and evolutionary speciation processes.
4. How can controlled in vitro systems and genetic models advance understanding of molecular and cellular processes in gamete differentiation, meiotic initiation, and crossover patterning in reproduction?
This theme addresses methodological innovations that enable the detailed study of germ cell development, meiotic events, and crossover regulation through experimental models and genetic tools. It includes development of in vitro culture systems for mammalian spermatogenesis, molecular genetic dissection of mating type determinants in algae, and modulation of crossover frequency and interference through manipulation of meiotic proteins and chromosome architecture, providing insights into fundamental reproductive biology and genome stability.
5. How do molecular genetic and biochemical mechanisms, such as mismatch repair and DNA sequence divergence, contribute to species boundaries and genome integrity during evolution?
This theme explores molecular mechanisms underpinning reproductive isolation and genome stability, focusing on how DNA sequence divergence and mismatch repair (MMR) systems act as barriers to homologous recombination between diverging genomes or polymorphic repeats. It elucidates how these mechanisms maintain species identity (speciation), prevent ectopic recombination among repeated sequences, and preserve genome integrity amid homologous and homeologous interactions, impacting evolutionary biology and genome evolution.
6. How can reproductive strategies such as uniparental inheritance, hybridogenesis, and the regulation of defective genetic contributions affect genome stability and reproductive fitness in vertebrates and other eukaryotes?
This theme focuses on reproductive modes that involve selective inheritance or elimination of parental genomes, such as hybridogenesis, uniparental nuclear inheritance, and gynogenesis, and examines their consequences on progeny viability, genome integrity, and evolutionary fitness. It also studies strategies to mitigate deleterious effects from residual sperm DNA fragments in gynogenetic fish, providing insight into the control of genome composition, hybrid sterility, and reproductive isolation.