Key research themes
1. What are the biochemical roles and detection methods of canonical and non-canonical cyclic nucleotides as second messengers in cellular signaling?
This research area focuses on the characterization, biochemical pathways, and functional roles of both classical cyclic nucleotides—cAMP and cGMP—and emerging non-canonical cyclic nucleotides such as cCMP, cUMP, and others. The significance lies in understanding their synthesis, effector activation, degradation, and implications in physiological and pathological contexts, along with advanced methods for their detection and structural profiling.
2. How do prebiotic environmental conditions affect the stability and nonenzymatic oligomerization of cyclic nucleotides relevant to the origin of life?
This theme investigates the abiotic chemical pathways and environmental factors (e.g., temperature, solvent type, dry-wet cycling) that influence the formation, stability, and oligomerization of cyclic nucleotides. Such studies provide molecular insights into prebiotic chemistry scenarios leading to the emergence of RNA and DNA, focusing on the physicochemical parameters controlling nucleotide polymer formation and their potential to serve as primordial genetic materials.
3. What molecular mechanisms underlie cyclic nucleotide-based regulation of protein kinases, and how can nucleotide selectivity and conformational changes be modulated for signal tuning?
This area explores the structure-function relationships of kinase regulatory subunits and ion channels that bind cyclic nucleotides, focusing on specificity determinants for cAMP versus cGMP, the resultant conformational dynamics, and the effects on downstream signaling pathways. It also encompasses the discovery of proteins harboring intertwined cyclase, phosphodiesterase, and kinase activities that finetune cyclic nucleotide homeostasis, underpinning cellular signal modulation.