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Chlorophyll Fluorescence

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lightbulbAbout this topic
Chlorophyll fluorescence is the emission of light by chlorophyll molecules during the return from an excited state to the ground state, primarily occurring in plants and algae. It serves as an indicator of photosynthetic efficiency and stress responses, providing insights into plant health and the dynamics of photosynthesis.
lightbulbAbout this topic
Chlorophyll fluorescence is the emission of light by chlorophyll molecules during the return from an excited state to the ground state, primarily occurring in plants and algae. It serves as an indicator of photosynthetic efficiency and stress responses, providing insights into plant health and the dynamics of photosynthesis.

Key research themes

1. How does the OJIP fluorescence transient reveal the mechanistic details of Photosystem II function?

This research area investigates the rapid chlorophyll a fluorescence induction kinetics (often termed the Kautsky effect or OJIP transient), focusing on the photochemical reactions in Photosystem II (PSII). The goal is to understand the relation between fluorescence steps (O, J, I, P, including K and others) and the electron transfer events within PSII, particularly the reduction and oxidation states of electron acceptors like QA and QB. The insights enable non-invasive, sensitive probing of photosynthetic efficiency and PSII heterogeneity under various physiological and stress conditions.

by FNU Govindjee and 
1 more
Key finding: This educational review established the mechanistic basis of the fast OJIP fluorescence transient as a sensitive indicator of PSII photochemistry, elaborating on the interpretation of fluorescence rise steps (O, J, I, P) in... Read more
Key finding: Using the most detailed PSII reaction model to date, this study quantitatively connected fluorescence rise steps O, K, J, I, P to specific PSII reactions such as charge separation, recombination, and quencher states under... Read more
by Dusan Lazar and 
1 more
Key finding: This work revealed that the relative amplitudes of J and I steps in the OJIP transient are not solely dependent on excitation irradiance but also strongly influenced by sample concentration and thickness, due to non-uniform... Read more
Key finding: This comprehensive review analyzed various kinetic and mechanistic models developed during the past two decades to simulate the OJIP fluorescence rise. It highlighted that while models based primarily on QA redox state... Read more
Key finding: This review emphasized the two-phase nature of the fast fluorescence induction: a photochemical O–J phase linked to QA reduction, and a slower, thermal J–I–P phase possibly influenced by processes other than QA redox state... Read more

2. What practical methodological considerations influence the accurate measurement and interpretation of chlorophyll fluorescence signals in vivo?

This theme encompasses the instrumentation, protocols, and interpretative frameworks necessary to obtain reliable chlorophyll a fluorescence data from plants. It addresses challenges such as dark adaptation duration, selection of excitation wavelengths, fluorescence signal meaning, and experimental artifacts. Understanding these practical aspects is critical for ensuring that fluorescence measurements correctly reflect physiological states of photosynthetic organisms, enabling their use in stress detection, photosynthetic performance assessment, and ecological studies.

Key finding: Presented as an accessible Q&A, this educational review clarified practical aspects of chlorophyll fluorescence measurement including dark adaptation requirements, instrument types (e.g., PAM, FRR fluorometers), and signal... Read more
Key finding: This historical perspective traced the evolution of chlorophyll fluorescence measurement techniques and conceptual understanding, emphasizing non-photochemical quenching, state transitions, and fluorescence variability... Read more
Key finding: This detailed review consolidated current theories and measurement approaches for fluorescence induction curves under diverse light intensities. It discussed fluorescence parameters (F0, FM, FV/FM), effects of inhibitors like... Read more
Key finding: This comprehensive review explained the theoretical basis of chlorophyll fluorescence emission and its links to photosynthetic processes and redox states within PSII. It detailed the JIP-test analysis of fluorescence... Read more
Key finding: This state-of-the-art review outlined measurement setups and protocols for passive chlorophyll fluorescence detection from leaf to canopy scales, emphasizing challenges of extracting the weak fluorescence signal among ambient... Read more

3. How does variable chlorophyll fluorescence reflect physiological and biochemical responses of photosynthetic organisms under biotic and abiotic stresses?

This research theme explores the responsiveness of chlorophyll fluorescence parameters as sensitive indicators of plant physiological condition, especially under stress. Fluorescence imaging and polyphasic transient analyses provide spatiotemporal resolution of photosystem II efficiency, electron transport disruptions, and acclimation processes. The studies link fluorescence changes to specific stressors like heat, drought, chemical agents, and pathogen infection, thereby enabling early stress detection and mechanistic insight into photosynthetic regulation and damage.

Key finding: Beyond methodological discussions, this paper detailed applications of fluorescence parameters in evaluating stress responses by quantifying effects on electron transport chain components, PSII repair, and non-photochemical... Read more
Key finding: This study demonstrated that the slow fluorescence induction phase (S to M rise), corresponding to state transition processes between state 2 and state 1, was diminished in a mutant locked in state 1. This finding establishes... Read more
by Dusan Lazar and 
1 more
Key finding: Combining experimental fluorescence temperature curves with modeling, this study revealed differing mechanisms underlying heat-induced fluorescence rise, including thermal inhibition of PSII electron transfer and modified... Read more
Key finding: This editorial summarized advances and applications of chlorophyll fluorescence imaging to resolve spatial heterogeneity of photosynthetic performance under diverse stresses. It highlighted studies showing fluorescence... Read more
Key finding: This work presented evidence that Photosystem I fluorescence contributes measurably and variably to in vivo chlorophyll fluorescence signals, challenging the classical view of exclusive PSII variability. By multi-wavelength... Read more

All papers in Chlorophyll Fluorescence

Viruses associated to eight Alstroemeria varieties and the relationship of thrips density and environmental factors with Tomato Spotted Wilt (TSW) intensity as well as the TSW effect on yield were studied in 'Rosario' in Central Mèxico.... more
extraction of agron omic parameters in orch ard plots from h igh -resolu tion imagery. In : Erena M. (coord.), López-Francos A. (coord.), Montesinos S. (coord.), Berthoumieu J.-P. (coord.). The use of remote sensing and geographic... more
Using simultaneous measurements of leaf gas exchange and chlorophyll fluorescence, we determined the excitation partitioning to photosystem I1 (PSII), the CO,/O, specificity of ribulose-l,5bisphosphate carboxylase/oxygenase, the dark... more
The aim of this study was to investigate the influence of copper and vanadium ions on photosynthetic activity of carrot (Daucus carota L. subsp. sativus (Hoffm.) Schübl. & G. Martens) and winter wheat (Triticum aestivum L.). Measurements... more
Regional Agrochemical Station in Lublin, Sławinkows ka 5, 20-810 Lublin, Poland Department of Agricultural and Environmental Chemis try, University of Life Sciences Akademicka 15, 20-033 Lublin, Poland Department of Plant Physiology,... more
Drought is a significant constraint in bean production. In this study, we used high-throughput phenotyping methods (chlorophyll fluorescence imaging, multispectral imaging, 3D multispectral scanning) to monitor the development of... more
Background and Aims Depending on cultivar, surfaces of young leaves of Vitis vinifera may be glabrous-green ('Soultanina') or transiently have anthocyanins ('Siriki') or pubescence ('Athiri'). A test is made of the hypothesis that... more
Background Most nanoparticles (NPs) have a significant impact on the structure and function of the plant photosynthetic apparatus. However, their spectrum of action varies significantly, from beneficial stimulation to toxicity, depending... more
This study was carried out to determine the effect of different zinc concentrations on the ecophysiological response of Salix clones: four commercial clones ("1962", "1968", "Drago", and "Levante") selected for short rotation coppice, and... more
The authors express their thanks for the support provided by the ECOPOLARIS project (CZ.02.1.01/0.0/0.0/ 16_013/0001708) and the CzechPolar2 (LM2015078) infrastructure (EEL laboratory, Masaryk University, Brno).
Growth, net photosynthetic rate (P N ), chlorophyll fluorescence induction kinetics, and stromal fructose-1,6-bisphosphatase (sFBPase) in annual legumes native to the Mediterranean region, two clovers (Trifolium subterraneum L. ssp.... more
Net photosynthetic rate (PN), productivity and the first phases of the fluorescence induction curve were investigated in leaves of two potato cultivars exposed to water stress. Water stress applied to potato plants at the beginning of... more
The photosynthetic efficiency in plants is affected by salinity. Focus of this study was to observe the consequences of salinity on the rate of photosynthesis in Moringa (Moringa oleifera L.) plants. Experiment was conducted under field... more
Gross primary production (GPP) is closely associated with processes such as photosynthesis and transpiration within ecosystems, which is a vital component of the global carbon-water-energy cycle. Accurate prediction of GPP in terrestrial... more
Biostimulants are substances able to improve water and nutrient use efficiency and counteract stress factors by enhancing primary and secondary metabolism. Premise of the work was to exploit raw extracts from leaves (LE) or flowers (FE)... more
To assess the reliability and sensitivity of non-invasive optical methods to detect the early effects of water deficit in the field, we analyzed the time-series of non-invasive measurements obtained in a dry season in a representative... more
Kopenske rastline se soočajo s problemom, kako sprejeti iz ozračja ustrezno količino CO 2 in pri tem omejiti oddajanje vode. Rešitev tega problema je uravnavanje prevodnosti listnih rež. Da je v danih razmerah dosežena optimalna... more
Peanut is a major oilseeds crop of India with its largest area in the world, but its productivity is less than the world average. Though India has released a number of peanut cultivars, studies on the physiological efficiencies of such... more
The effects of short-time fumigation (0-60 min) of intact spinach leaves with S0 2 (2 ppm) on the photosynthetic apparatus were investigated. A rather high S0 2 concentration was applied to monitor immediate effects on the fluorescence... more
Waterlogging is an important environmental stress limiting the productivity of crops worldwide. Cowpea ( Vigna unguiculata L) is particularly sensitive to waterlogging stress during the reproductive stage, with a consequent decline in pod... more
Cocoa (Theobroma cacao L.) is an important cash crop in many tropical countries, particularly in West Africa. Heat and drought are both known to affect the physiology of cocoa plants through reduced rates of photosynthesis and... more
Optical sensors for fluorescence of chlorophyll a (f-Chl a ) and phycocyanin (f-PC) are increasingly used as a proxy for biomass of algae and cyanobacteria, respectively. They provide measurements at highfrequency and modest cost. These... more
Mapping the cellular refractive index (RI) is a central task for research involving the composition of microorganisms and the development of models providing automated medical screenings with accuracy beyond 95%. These models require... more
Although an extensive professional literature exists on biological soil crusts (BSCs), especially on the species composition of hetero- and autotrophs forming the micro-biological comunity, micromorphological information on BSCs is... more
It is shown that with a new flash-lamp chlorophyll (Chl) fluorescence imaging system (FL-FIS), the photosynthetic activity of several thousand points of an intact attached leaf can be screened in a non-destructive way within a few... more
Reflection spectra demonstrating the optical properties of leaves provide information on reflectance of some specific wavelength. These spectra allow to define the color of the leaves by chromatic coordinates and in addition also the... more
In Elbasan area plants are repeatedly exposed to a variety of environmental stressors which affect growth, physiological functions and yield. Industrial pollution and other stresses affect the reduction the activity of leaf photosynthetic... more
Air pollution by the metallurgical units, as the other stressors, can modify the optical and fluorescence properties of leaf plants either directly or indirectly. Therefore stress effects on plants are detectable via changed on... more
The chlorophyll (Chl) fluorescence signatures of leaves have been widely applied as non-invasive techniques for the in vivo analysis of plant stress. The Chl fluorescence provides ample information on the photosynthetic apparatus as first... more
The CEFLES2 campaign during the Carbo Europe Regional Experiment Strategy was designed to provide simultaneous airborne measurements of solar induced fluorescence and CO 2 fluxes. It was combined with extensive ground-based quantification... more
SUMMARYA key target for the improvement of Oryza sativa (rice) is the development of heat‐tolerant varieties. This necessitates the development of high‐throughput methodologies for the screening of heat tolerance. Progress has been made... more
Groundnut is frequently constrained by environmental conditions such as drought. Within this context, it is crucial to understand physiological mechanisms and identify specific physiological traits conferring drought tolerance. The... more
The xanthophyll cycle has been implicated as a possible photoprotective mechanism in higher plants and algae by dissipating excess excitation energy via non-photochemical q.uenching. To examine whether colonial Phaeocystis antarctica... more
Horticulture has become a significant agricultural venture in accelerating economic growth. Its contribution to a nation's food security, nutritional well-being, and poverty reduction and employment opportunities is pivotal. Among its... more
The aim of the present work was to compare the effect of ultralow oxygen (ULO) with dynamic controlled atmosphere (DCA) and controlled atmosphere (CA) on the post storage quality of 'Royal Gala' and 'Galaxy' apples after long-term... more
Lichens often grow in microhabitats where they absorb more light than they can use for fixing carbon, and this excess energy can cause the formation of harmful reactive oxygen species (ROS). Lichen mycobionts can reduce ROS formation by... more
Stressful episodic weather is likely to affect the C balance of trees as the climate changes, potentially altering survival. However, the role of elevated CO2 concentration ([CO2]) in tolerating off-season episodic extremes is not clear.... more
O experimento foi conduzido na Fazenda Capão dos Óleos, município de Coqueiral, Minas Gerais, de 2009 a 2011, objetivando verificar as modificações na anatomia foliar em cafeeiros implantados, com o uso de polímero hidrorretentor. Para... more
Saline and alkaline stresses affect more than 10% of the World's arable land, limiting agricultural production. Salt-induced stress may affect the Photosystem II (PSII) function, altering fluorescence emission. Therefore, changes in... more
Dramatic climate change has led to an increase in the intensity and frequency of drought episodes and, together with the high light conditions of the Mediterranean area, detrimentally influences crop production. Salicylic acid (SA) has... more
Salicylic acid (SA), an essential plant hormone, has received much attention due to its role in modulating the adverse effects of biotic and abiotic stresses, acting as an antioxidant and plant growth regulator. However, its role in... more
During winter, the light-harvesting complexes of evergreen plants change function from energy-harvesting to energy-dissipating centers. The goal of our study was to monitor changes in the composition of the photosynthetic apparatus that... more
During winter evergreens maintain a sustained form of thermal energy dissipation that results in reduced photochemical efficiency measured using the chlorophyll fluorescence parameter F v /F m . Eastern white pine (Pinus strobus L.) and... more
Although many Mediterranean and xeric plant species enhance their xanthophyll-mediated thermal dissipation under drought conditions, there has been limited research on photoprotective mechanism in droughted plants from other habitats. To... more
Chlorophyll fluorescence is one of the very useful techniques in plant physiology because of the ease with which the user can gain detailed information on the state of photosystem II (PSII) at a relatively low cost. Detection of... more
Arid and semiarid ecosystems in the Mediterranean are under high risk of desertification. Revegetation with native well‐adapted evergreen shrubs is desirable, but techniques for successful establishment of these species are not fully... more
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