An Introduction to Actinobacteria
2016, Actinobacteria - Basics and Biotechnological Applications
https://doi.org/10.5772/62329Abstract
Actinobacteria, which share the characteristics of both bacteria and fungi, are widely distributed in both terrestrial and aquatic ecosystems, mainly in soil, where they play an essential role in recycling refractory biomaterials by decomposing complex mixtures of polymers in dead plants and animals and fungal materials. They are considered as the biotechnologically valuable bacteria that are exploited for its secondary metabolite production. Approximately, 10,000 bioactive metabolites are produced by Actinobacteria, which is 45% of all bioactive microbial metabolites discovered. Especially Streptomyces species produce industrially important microorganisms as they are a rich source of several useful bioactive natural products with potential applications. Though it has various applications, some Actinobacteria have its own negative effect against plants, animals, and humans. On this context, this chapter summarizes the general characteristics of Actinobacteria, its habitat, systematic classification, various biotechnological applications, and negative impact on plants and animals.
References (100)
- Oskay AM, Usame T, Cem A. Antibacterial activity of some actinomycetes isolated from farming soils of Turkey. Afr J Biotechnol. 2005; 3(9):441-446.
- Tan H, Deng Z, Cao L. Isolation and characterization of actinomycetes from healthy goat faeces. Lett Appl Microbiol. 2009; 49(2):248-253.
- Schneider K, Nicholson G, Strobele M, Baur S, Niehaus J, Fiedler HP, Sussmuth RD. The structures of fluostatins C, D and E, novel members of the fluostatin family. J Antibiot. 2006; 59(2):105.
- Cundell DR and Piechoski MP. Potentially novel Actinobacteria derived antibiotics from unique microenvironments. In: Antimicrobials Synthetic and Natural Com- pounds. (Dhanasekaran et al., Eds), 2016, pp: 83-98, CRC Press, New York.
- Nithya K, Muthukumar C, Duraipandiyan V, Dhanasekaran D, Thajuddin N. Diver- sity and antimicrobial potential of culturable Actinobacteria from desert soils of Sau- di Arabia. J Pharm Sci Res. 2015; 7(3):117-122.
- Priyadharsini P, Dhanasekaran D. Diversity of soil allelopathic Actinobacteria in Tir- uchirappalli district, Tamilnadu, India. J Saud Soci Agri Sci. 2015; 14(1):54-60.
- Cross T. Aquatic actinomycetes: a critical survey of the occurrence, growth and role of actinomycetes in aquatic habitats. J Appl Bacterriol. 1981; 50(3):397-423.
- Makkar NS, Cross T. Actinoplanetes in soil and on plant litter from freshwater habi- tats. J Appl Bacterriol. 1982; 52(2):209-218.
- Johnston DW, Cross T. The occurrence and distribution of actinomycetes in lakes of the English Lake District. Freshwater Biol. 1976; 6(5):457-463.
- Al-Diwany LJ, Unsworth BA, Cross T. A comparison of membrane filters for count- ing Thermoactinomyces endospores in spore suspensions and river water. J Appl Bac- terriol. 1978; 45(2):249-258.
- Bull AT, Stach JE, Ward AC, Goodfellow M. Marine Actinobacteria: perspectives, challenges, future directions. A Van Leeuw. 2005; 87(1):65-79.
- Jensen PR, Mincer TJ, Williams PG, Fenical W. Marine actinomycete diversity and natural product discovery. A Van Leeuw. 2005; 87(1):43-48.
- Magarvey NA, Keller JM, Bernan V, Dworkin M, Sherman DH. Isolation and charac- terization of novel marine-derived actinomycete taxa rich in bioactive metabolites. Appl Environ Microbiol. 2004; 70(12):7520-7529.
- Jensen PR, Gontang E, Mafnas C, Mincer TJ, Fenical W. Culturable marine actinomy- cete diversity from tropical Pacific Ocean sediments. Environ Microbiol. 2005; 7(7): 1039-1048.
- Stach JE, Maldonado LA, Ward AC, Bull AT, Goodfellow M. Williamsia maris sp. nov., a novel actinomycete isolated from the Sea of Japan. Int J Syst Evol Microbiol. 2004; 54(1):191-194.
- Grossart HP, Schlingloff A, Bernhard M, Simon M, Brinkhoff T. Antagonistic activity of bacteria isolated from organic aggregates of the German Wadden Sea. FEMS Mi- crobila Ecol. 2004; 47(3):387-396.
- Inagaki F, Suzuki M, Takai K, Oida H, Sakamoto T, Aoki K, Nealson KH, Horikoshi K. Microbial communities associated with geological horizons in coastal sub seafloor sediments from the Sea of Okhotsk. Appl Environ Microbiol. 2003; 69(12):7224-7235.
- Dhanasekaran D, Rajakumar G, Sivamani P, Selvamani S, Panneerselvam A, Thajud- din N. Screening of salt pans actinomycetes for antibacterial agents. Internet J Micro- biol. 2005; 1(2):1-8.
- Dhanasekaran D, Panneerselvam A, Thajuddin N, Chandralekha S. Isolation, charac- terization of antibacterial methyl substituted β-lactam compound from Streptomyces noursei DPTD21 in saltpan soil, India. JBAPN. 2014; 4(2):71-88.
- Dhanasekaran D, Sakthi V, Thajuddin N, Panneerselvam A. Preliminary evaluation of Anopheles mosquito larvicidal efficacy of mangrove Actinobacteria. Int J Appl Biol Pharm Technol. 2010; 1(2):374-381.
- Holt JG, Krieg NR, Sneath PHA, Staley JT, Williams ST. Bergey's manual of determi- native bacteriology (9th ed). 1994, Williams and Wilkins, Baltimore.
- Madigan MT, Martinko JM, Parker J and Brock TD. Biology of microorganisms (Vol. 985). 1987, Prentice Hall, Upper Saddle River, NJ.
- Williams RJ, Zipser D. A learning algorithm for continually running fully recurrent neural networks. Neural Comput. 1989; 1(2):270-280.
- Yokota A. Phylogenetic relationship of actinomycetes. Atlas of actinomycetes. The Society for actinomycetes. 1997; 194.
- Jiang C, Xu L. Actinomycete diversity in unusual habitats. Actinomycetes. 1993; 4(2): 47-57.
- Khan MR, Williams ST. Studies on the ecology of actinomycetes in soil-VIII: Distri- bution and characteristics of acidophilic actinomycetes. Soil Biol Biochem. 1975; 7(6): 345-348.
- Hagedorn C. Influences of soil acidity on Streptomyces populations inhabiting forest soils. Appl Environ Microbiol. 1976; 32(3):368-375.
- Maldonado LA, Stach JE, Pathom-aree W, Ward AC, Bull AT, Goodfellow M. Diver- sity of cultivable Actinobacteria in geographically widespread marine sediments. A Van Leeuwenhoek. 2005; 87(1):8-11.
- Jensen PR, Mincer TJ, Williams PG, Fenical W. Marine actinomycete diversity and natural product discovery. A Van Leeuw. 2005; 87(1):43-48.
- Magarvey NA, Keller JM, Bernan V, Dworkin M, Sherman DH. Isolation and charac- terization of novel marine-derived actinomycete taxa rich in bioactive metabolites. Appl Environ Microbiol. 2004; 70(12):7520-7529.
- Riedlinger J, Reicke A, Zähner HA, Krismer B, Bull AT, Maldonado LA, Ward AC, Goodfellow M, Bister B, Bischoff D, Süssmuth RD. Abyssomicins, inhibitors of the para-aminobenzoic acid pathway produced by the marine Verrucosispora strain AB-18-032. J Antibiot. 2004; 57(4):271-279.
- Benson DR, Silvester WB. Biology of Frankia strains, actinomycete symbionts of acti- norhizal plants. Microbiol Rev. 1993; 57(2):293.
- Thajuddin N, Muralitharan G, Dhanasekaran D, Muhammad Ilyas MH. Microbial symbionts of plants. In: Plant Biology and Biotechnology (Bahadur et al., Eds), 2015, DOI 10.1007/978-81-322-2286-6_11. Springer, India.
- Tan H, Deng Z, Cao L. Isolation and characterization of actinomycetes from healthy goat faeces. Lett Appl Microbio. 2009; 49(2):248-253.
- Latha S, Dhanasekaran D. Antibacterial and extracellular enzyme activities of gut Ac- tinobacteria isolated from Gallus gallus domesticus and Capra hircus. J Chem Pharma Res. 2013; 5(11):379-385
- Latha S, Vinothini G, Calvin DJ, Dhanasekaran D. In vitro probiotic profile based se- lection of indigenous Actinobacterial probiont Streptomyces sp. JD9 for enhanced broiler production. J Biosci Bioeng. 2016; 121(1):124-131.
- Dancer SJ. How antibiotics can make us sick: the less obvious adverse effects of anti- microbial chemotherapy. Lancet Infect Dis. 2004; 4(10):611-619.
- Jensen PR, Dwight RY, Fenical W. Distribution of actinomycetes in near-shore tropi- cal marine sediments. Appl Environ Microbiol. 1991; 57(4):1102-1108.
- Hassan AA, El-Barawy AM, El Mokhtar MN. Evaluation of biological compounds of Streptomyces species for control of some fungal diseases. J Am Sci. 2011; 7(4):752-760.
- Ramesh S, Mathivanan N. Screening of marine actinomycetes isolated from the Bay of Bengal, India for antimicrobial activity and industrial enzymes. World J Microbiol Biotechnol. 2009; 25(12):2103-2111.
- Jensen PR, Williams PG, Oh DC, Zeigler L, Fenical W. Species-specific secondary me- tabolite production in marine actinomycetes of the genus Salinispora. Appl Environ Microbiol. 2007; 73(4):1146-1152.
- Kurtboke DI. Biodiscovery from rare actinomycetes: an eco-taxonomical perspective. Appl Microbiol Biotechnol. 2012; 93(5):1843-1852.
- Laskaris P, Tolba S, Calvo-Bado L, Wellington L. Coevolution of antibiotic produc- tion and counter-resistance in soil bacteria. Environ Microbiol. 2010; 12(3):783-796.
- Schatz A, Bugie E, Waksman SA, Hanssen AD, Patel R, Osmon DR. The classic: streptomycin, a substance exhibiting antibiotic activity against Gram-positive and Gram-negative bacteria. Clin Orthop Relat Res. 2005; 437:3-6.
- Pandey A, Nigam P, Soccol CR, Soccol VT, Singh D, Mohan R. Advances in microbial amylases. Biotechnol Appl Biochem. 2000; 31: 135-152.
- Schmid RD, Verger R. Lipases: interfacial enzymes with attractive applications. An- gewandte Chemie 1998; 37(12):1608-1633.
- Sharmin S, Towhid Hossain MD and Anwar MN. Isolation and characterization of a protease producing bacteria Bacillus amonvivorus and optimization of some factors of culture conditions for protease production. J Biol Sci. 2005; 5(3):358-362
- Dejong PJ. L-asparaginase production by Streptomyces griseus. Appl Microbiol. 1972; 23(6):1163-1164.
- Narayana KJ, Kumar KG, Vijayalakshmi M. L-asparaginase production by Streptomy- ces albidoflavus. Indian J Microbiol. 2008; 48(3):331-336.
- Saha S, Dhanasekaran D, Shanmugapriya S, Latha S. Nocardiopsis sp. SD5: a potent feather degrading rare actinobacterium isolated from feather waste in Tamil Nadu, India. J Basic Microbiol. 2013; 53(7):608-616.
- Xiliang J. The mechanism of agricultural antibiotic. Biol Control Aviso. 1994; 10 (2), 76-81.
- Pillmoor JB. Carbocyclic coformycin: a case study of the opportunities and pitfalls in the industrial search for new agrochemicals from nature. Pestic Sci. 1998; 52(1):75-80.
- Yan Chu S. New developments of agricultural antibiotic pesticide. Trans. (China). 1993; 15 (6):5-12.
- Dhanasekaran D, Thajuddin N, Panneerselvam A. Herbicidal agents from actinomy- cetes against selected crop plants and weeds. Nat Prod Res. 2010; 24(6):521-529.
- Dhanasekaran D, Ambika K, Thajuddin N, Panneerselvam A. Allelopathic effect of Actinobacterial isolates against selected weeds. Arch Phytopathol Plant Protect. 2012; 45(5):505-521.
- Priyadharsini P, Dhanasekaran D, Kanimozhi B. Isolation, structural identification and herbicidal activity of N-phenylpropanamide from Streptomyces sp. KA1-3. Arch Phytopathol Plant Protect. 2013; 46(3):364-373.
- Priyadharsini P, Dhanasekaran D, Kanimozhi B. Isolation and structural characteri- zation of N-(naphthalene-1-yl) Propanamide, a herbicidal compound from Streptomy- ces sp. KA1-3. In: Microbiological Research in Agroecosystem Management (Rajesh Kannan Eds), 2013, pp. 187-195. Springer, India.
- You J, Xue X, Cao L, Lu X, Wang J, Zhang L, Zhou S. Inhibition of Vibrio biofilm for- mation by a marine actinomycete strain A66. Appl Microbiol Biotechnol. 2007; 76(5): 1137-1144.
- Das S, Lyla PS, Khan SA. Marine microbial diversity and ecology: importance and fu- ture perspectives. Curr Sci. 2006; 90(10):1325-35.
- Yagi Y, Kessler RE, Shaw JH, Lopatin DE, An F, Clewell DB. Plasmid content of Streptococcus faecalis strain 39-5 and identification of a pheromone (cPD1)-induced surface antigen. J Gen Microbiol. 1983; 129(4):1207-1215.
- Ehrenfeld EE, Kessler RE, Clewell DB. Identification of pheromone-induced surface proteins in Streptococcus faecalis and evidence of a role for lipoteichoic acid in forma- tion of mating aggregates. J Bacteriol. 1986; 168(1):6-12.
- Schachtsiek M, Hammes WP, Hertel C. Characterization of Lactobacillus coryniformis DSM 20001T surface protein Cpf mediating coaggregation with and aggregation among pathogens. Appl Environ Microbiol. 2004; 70(12):7078-7085.
- Muthu Selvam R, Vinothini G, Palliyarai Thaiyammal S, Latha S, Arunachalam C, Al- harbi S, Dhanasekaran D, Padmanabhan P, Archunan G. Cell aggregating propensity of probiotic Actinobacterial isolates: isolation and characterization of the aggregation inducing peptide pheromone. Biofouling. 2016; 32(1): 71-80.
- Henkel M, Muller MM, Kugler JH, Lovaglio RB, Contiero J, Syldatk C, Hausmann R. Rhamnolipids as biosurfactants from renewable resources: concepts for next-genera- tion rhamnolipid production. Process Biochem. 2012; 47(8):1207-1219.
- Muller MM, Kugler JH, Henkel M, Gerlitzki M, Hormann B, Pohnlein M, Syldatk C, Hausmann R. Rhamnolipids-next generation surfactants. J Biotechnol. 2012; 162(4): 366-380.
- Marchant R, Banat IM. Microbial biosurfactants: challenges and opportunities for fu- ture exploitation. Trends Biotechnol. 2012; 30(11):558-565.
- Robbins WJ, Hervey A, Stebbins ME. Studies on Euglena and vitamin B12. Bull Tor- rey Bot Club. 1950:423-441.
- Rickes EL, Brink NG, Koniuszy FR, Wood TR, Folkers K. Crystalline vitamin B12. Sci. 1948; 107(2781):396-397.
- Lichtman H, Watson J, Ginsberg V, Pierce JV, Stokstad EL, Jukes TH. Vitamin B12b some properties and its therapeutic use. Exp Biol Med.1949; 72(3):643-645.
- Gopinath PM, Dhanasekaran D, Ranjani A, Thajuddin N, Akbarsha MA, Velmuru- gan M, Panneerselvam A. Optimization of sporicidal activity and environmental Ba- cillus endospores decontamination by biogenic silver nanoparticle. Future Microbiol. 2015; 10(5):725-741.
- Ranjani A, Gopinath PM, Rajesh K, Dhanasekaran D, Priyadharsini P. Diversity of silver nanoparticle synthesizing Actinobacteria isolated from marine soil, Tamil Na- du, India. Arab J Sci Eng. 2016; 41(1):25-32.
- Johnsen AR, Winding A, Karlson U, Roslev P. Linking of microorganisms to phenan- threne metabolism in soil by analysis of 13C-labeled cell lipids. Appl Environ Micro- biol. 2002; 68(12):6106-6113.
- Sanscartier D, Zeeb B, Koch I, Reimer K. Bioremediation of diesel-contaminated soil by heated and humidified biopile system in cold climates. Cold Reg Sci Technol. 2009; 55(1):167-173.
- Radwan SS, Barabás G, Sorkhoh NA, Damjanovich S, Szabo I, Szollosi J, Matko J, Pe- nyige A, Hirano T, Szabo IM. Hydrocarbon uptake by Streptomyces. FEMS Microbiol Lett. 1998; 169(1):87-94.
- Barabas G, Vargha G, Szabo IM, Penyige A, Damjanovich S, Szollosi J, MatkoJ, Hira- no T, Matyus A, Szabo I. n-Alkane uptake and utilisation by Streptomyces strains. A Van Leeuw. 2001; 79(3-4):269-276.
- Mason MG, Ball AS, Reeder BJ, Silkstone G, Nicholls P, Wilson MT. Extracellular heme peroxidases in actinomycetes: a case of mistaken identity. Appl Environ Micro- biol. 2001; 67(10):4512-4519.
- Behal V. Bioactive products from Streptomyces. Adv Appl Microbiol. 2000; 47:113-156.
- Tanaka Y, Omura S. Agroactive compounds of microbial origin. Annu Rev Micro- biol. 1993; 47(1):57-87.
- Umezawa H, Okami Y, Hashimoto T, Suhara Y, Hamada M, Takeuchi T. A new anti- biotic, kasugsmycin. J antibiot. 1965; 18:101-103.
- Isono K, Nagatsu J, Kawashima Y, Suzuki S. Studies on polyoxins, antifungal antibi- otics: Part I. isolation and characterization of polyoxins A and B. Agric Biol Chem. 1965; 29(9):848-854.
- Endo A, Misato T. Polyoxin D, a competitive inhibitor of UDP-N-acetylglucosamine: chitin N-acetylglucosaminyltransferase in Neurospora crassa. Biochem Biophys Res Commun. 1969; 37(4):718-722.
- Kameda K, Takaku T, Okuda H, Kimura Y, Okuda T, Hatano T, Agata I, Arichi S. Inhibitory effects of various flavonoids isolated from leaves of persimmon on angio- tensin-converting enzyme activity. J Nat Prod. 1987; 50(4):680-683.
- Ikeda H, Omura S. Control of avermectin biosynthesis in Streptomyces avermitilis for the selective production of a useful component. J Antibiot. 1995; 48(7):549-562.
- Aldesuquy HS, Mansour FA, Abo-Hamed SA. Effect of the culture filtrates of Strepto- myces on growth and productivity of wheat plants. Folia Microbiol. 1998; 43(5): 465-470.
- Glick BR. The enhancement of plant growth by free-living bacteria. Cand J Microbiol. 1995; 41(2):109-117.
- Merriman PR, Price RD, Kollmorgen JF, Piggott T, Ridge EH. Effect of seed inocula- tion with Bacillus subtilis and Streptomyces griseus on the growth of cereals and car- rots. Crop Pasture Sci. 1974; 25(2):219-226.
- El-Abyad MS, El-Sayed MA, El-Shanshoury AR, El-Sabbagh SM. Towards the biolog- ical control of fungal and bacterial diseases of tomato using antagonistic Streptomyces spp. Plant Soil. 1993; 149(2):185-195.
- Manulis S, Shafrir H, Epstein E, Lichter A, Barash I. Biosynthesis of indole-3-acetic acid via the indole-3-acetamide pathway in Streptomyces spp. Microbiol. 1994; 140(5): 1045-1050.
- Vijayan V, Balaraman K. Metabolites of fungi & actinomycetes active against mosqui- to larvae. Indian J Med Res. 1991; 93:115-117.
- Rajesh K, Padmavathi KC, Ranjani A, Gopinath PM, Dhanasekaran D, Archunan G. Green Synthesis, characterization and larvicidal activity of AgNps against Culex quin- quefasciatus and Aedes aegypti Larvae. Am J Drug Disc Develop. 2013; 3(4):245-253.
- Rajesh K, Dhanasekaran D, Tyagi BK. Mosquito survey and larvicidal activity of Ac- tinobacterial isolates against Culex larvae (Diptera: Culicidae). J Saudi Soc Agr Sci. 2013; 14(2):116-122.
- Ando K. How to discover new antibiotics for insecticidal use. In: Natural Products: Proceedings of the 5th International Congress of Pesticide Chemistry (Takahashi et al., Eds), 1982, pp. 253, Elsevier, Kyoto, Japan.
- Pampiglione S, Majori G, Petrangeli G, Romi R. Avermectins, MK-933 and MK-936, for mosquito control. Trans R Soc Trop Med Hyg. 1985; 79(6):797-799.
- Zizka Z, Weiser J, Blumauerova M, Jizba J. Ultrastructural effects of macrotetrolides of Streptomyces griseus LKS-1 in tissues of Culex pipiens larvae. Cytobios. 1988; 233:85-91.
- Rao KV, Chattopadhyay SK, Reddy GC. Flavonoids with mosquito larval toxicity. J Agr Food Chem. 1990; 38(6):1427-1430.
- Gerber NN, Lechevalier HA. Geosmin, an earthy-smelling substance isolated from actinomycetes. Appl microbiol. 1965; 13(6):935-938.
- Gaines HD, Collins RP. Volatile substances produced by Streptomyces odorifer. Lloy- dia. 1963; 26(4):247.
- Rogosa M, Cummins CS, Lelliott RA, Keddie RM. Actinomycetes and related organ- isms. Bergey's Manual of Determinative Bacteriology. 1974; 8:599-881.
- Dopfer H, Stackebrandt E, Fiedler F. Nucleic acid hybridization studies on Microbac- terium, Curtobacterium, Agromyces and related taxa. J Gen Microbiol. 1982; 128(8): 1697-1708.
- Dye DW, Kemp WJ. A taxonomic study of plant pathogenic Corynebacterium species. New Zeal J Agr Res. 1977; 20(4):563-582.